Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-889 in CA Breast Richardson Cluster 58 Table contains all genes in the CA Breast Richardson cluster number 58. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-889 55854 ZC3H15 zinc finger CCCH-type containing 15 [Source:HGNC Symbol;Acc:29528] zzz999 51602 NOP58 NOP58 ribonucleoprotein homolog (yeast) [Source:HGNC Symbol;Acc:29926] zzz999 92667 C20orf72 chromosome 20 open reading frame 72 [Source:HGNC Symbol;Acc:16205] zzz999 163786 SASS6 spindle assembly 6 homolog (C. elegans) [Source:HGNC Symbol;Acc:25403] T 6747 SSR3 signal sequence receptor, gamma (translocon-associated protein gamma) [Source:HGNC Symbol;Acc:11325] zzz999 1427 CRYGS crystallin, gamma S [Source:HGNC Symbol;Acc:2417] zzz999 10721 POLQ polymerase (DNA directed), theta [Source:HGNC Symbol;Acc:9186] zzz999 64105 CENPK centromere protein K [Source:HGNC Symbol;Acc:29479] T 56902 PNO1 partner of NOB1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:32790] zzz999 27340 UTP20 UTP20, small subunit (SSU) processome component, homolog (yeast) [Source:HGNC Symbol;Acc:17897] zzz999 55676 SLC30A6 solute carrier family 30 (zinc transporter), member 6 [Source:HGNC Symbol;Acc:19305] zzz999 8697 CDC23 cell division cycle 23 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:1724] T 79968 WDR76 WD repeat domain 76 [Source:HGNC Symbol;Acc:25773] zzz999 64149 C17orf75 chromosome 17 open reading frame 75 [Source:HGNC Symbol;Acc:30173] zzz999 11062 DUS4L dihydrouridine synthase 4-like (S. cerevisiae) [Source:HGNC Symbol;Acc:21517] T 389898 UBE2NL ubiquitin-conjugating enzyme E2N-like [Source:HGNC Symbol;Acc:31710] zzz999 23658 LSM5 LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae) [Source:HGNC Symbol;Acc:17162] zzz999 92092 ZC3HAV1L zinc finger CCCH-type, antiviral 1-like [Source:HGNC Symbol;Acc:22423] zzz999 941 CD80 CD80 molecule [Source:HGNC Symbol;Acc:1700] zzz999 130827 TMEM182 transmembrane protein 182 [Source:HGNC Symbol;Acc:26391] P T 348654 GEN1 Gen homolog 1, endonuclease (Drosophila) [Source:HGNC Symbol;Acc:26881] zzz999 57122 NUP107 nucleoporin 107kDa [Source:HGNC Symbol;Acc:29914] zzz999 57696 DDX55 DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Source:HGNC Symbol;Acc:20085] zzz999 10849 CD3EAP CD3e molecule, epsilon associated protein [Source:HGNC Symbol;Acc:24219] zzz999 56906 THAP10 THAP domain containing 10 [Source:HGNC Symbol;Acc:23193] T 6160 RPL31 ribosomal protein L31 [Source:HGNC Symbol;Acc:10334] zzz999 134510 UBLCP1 ubiquitin-like domain containing CTD phosphatase 1 [Source:HGNC Symbol;Acc:28110] zzz999 4999 ORC2 origin recognition complex, subunit 2 [Source:HGNC Symbol;Acc:8488] T 9585 KIF20B kinesin family member 20B [Source:HGNC Symbol;Acc:7212] zzz999 5062 PAK2 p21 protein (Cdc42/Rac)-activated kinase 2 [Source:HGNC Symbol;Acc:8591] zzz999 51163 DBR1 debranching enzyme homolog 1 (S. cerevisiae) [Source:HGNC Symbol;Acc:15594] T 56922 MCCC1 methylcrotonoyl-CoA carboxylase 1 (alpha) [Source:HGNC Symbol;Acc:6936] zzz999 8540 AGPS alkylglycerone phosphate synthase [Source:HGNC Symbol;Acc:327] P T 55905 RNF114 ring finger protein 114 [Source:HGNC Symbol;Acc:13094] T 79675 FASTKD1 FAST kinase domains 1 [Source:HGNC Symbol;Acc:26150] zzz999 205327 C2orf69 chromosome 2 open reading frame 69 [Source:HGNC Symbol;Acc:26799] T 23594 ORC6 origin recognition complex, subunit 6 [Source:HGNC Symbol;Acc:17151] zzz999 116211 TM4SF19 transmembrane 4 L six family member 19 [Source:HGNC Symbol;Acc:25167] zzz999 339559 ZNF642 zinc finger protein 642 [Source:HGNC Symbol;Acc:24708] zzz999 7475 WNT6 wingless-type MMTV integration site family, member 6 [Source:HGNC Symbol;Acc:12785] zzz999 539 ATP5O ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit [Source:HGNC Symbol;Acc:850] zzz999 10054 UBA2 ubiquitin-like modifier activating enzyme 2 [Source:HGNC Symbol;Acc:30661] T 54957 TXNL4B thioredoxin-like 4B [Source:HGNC Symbol;Acc:26041] zzz999 84128 WDR75 WD repeat domain 75 [Source:HGNC Symbol;Acc:25725] T 11073 TOPBP1 topoisomerase (DNA) II binding protein 1 [Source:HGNC Symbol;Acc:17008] T 8089 YEATS4 YEATS domain containing 4 [Source:HGNC Symbol;Acc:24859] T 55922 NKRF NFKB repressing factor [Source:HGNC Symbol;Acc:19374] zzz999 121441 NEDD1 neural precursor cell expressed, developmentally down-regulated 1 [Source:HGNC Symbol;Acc:7723] T 54529 ASNSD1 asparagine synthetase domain containing 1 [Source:HGNC Symbol;Acc:24910] zzz999 54952 TRNAU1AP tRNA selenocysteine 1 associated protein 1 [Source:HGNC Symbol;Acc:30813] zzz999 90799 CEP95 centrosomal protein 95kDa [Source:HGNC Symbol;Acc:25141] zzz999 22916 NCBP2 nuclear cap binding protein subunit 2, 20kDa [Source:HGNC Symbol;Acc:7659] zzz999 79691 QTRTD1 queuine tRNA-ribosyltransferase domain containing 1 [Source:HGNC Symbol;Acc:25771] T 1147 CHUK conserved helix-loop-helix ubiquitous kinase [Source:HGNC Symbol;Acc:1974] P T 1964 EIF1AX eukaryotic translation initiation factor 1A, X-linked [Source:HGNC Symbol;Acc:3250] zzz999 375444 C5orf34 chromosome 5 open reading frame 34 [Source:HGNC Symbol;Acc:24738] zzz999 10308 ZNF267 zinc finger protein 267 [Source:HGNC Symbol;Acc:13060] T 10588 MTHFS 5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase) [Source:HGNC Symbol;Acc:7437] T 10592 SMC2 structural maintenance of chromosomes 2 [Source:HGNC Symbol;Acc:14011] T 6102 RP2 retinitis pigmentosa 2 (X-linked recessive) [Source:HGNC Symbol;Acc:10274] P T 10959 TMED2 transmembrane emp24 domain trafficking protein 2 [Source:HGNC Symbol;Acc:16996] zzz999 55285 RBM41 RNA binding motif protein 41 [Source:HGNC Symbol;Acc:25617] zzz999 9622 KLK4 kallikrein-related peptidase 4 [Source:HGNC Symbol;Acc:6365] zzz999 22868 FASTKD2 FAST kinase domains 2 [Source:HGNC Symbol;Acc:29160] zzz999 80155 NAA15 N(alpha)-acetyltransferase 15, NatA auxiliary subunit [Source:HGNC Symbol;Acc:30782] zzz999 9330 GTF3C3 general transcription factor IIIC, polypeptide 3, 102kDa [Source:HGNC Symbol;Acc:4666] zzz999 1962 EHHADH enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase [Source:HGNC Symbol;Acc:3247] T 80304 C2orf44 chromosome 2 open reading frame 44 [Source:HGNC Symbol;Acc:26157] T 5994 RFXAP regulatory factor X-associated protein [Source:HGNC Symbol;Acc:9988] T

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